create a vocal assistant with random japanese citations #vocal assistant #robot #ubuntu
#install speak assistant sudo apt-get install espeak-ng espeak-ng-espeak sudo apt-get install libttspico-utils #check if french...
Variant calling pipeline with best practices for illumina target sequencing #NGS #pipeline #genomics
Shell BASH pipeline for Illumina target sequencing with GATK 3.1 best practices: https://github.com/cdesterke/miseq
platypus variant calling region files #awk #commandline #ngs #variant caller #platypus
for target sequencing platypus variant caller needs a file with regions in a specific format: chr1:100-200 awk allow to transform a bed...
oral session symposium #single cell #trajectory
system biology : speaker on single cell trajectory modelization
gene2tf software annotation of human transcription factor #epigenetics #transcription #omics
gene2tf is a BASH software which allow annotation of human transcription factor in an input gene list (Vaquerizas et al., 2009). Links...
Smartphone android apk BMI #android #javascript
application android built with cordova which allow to quantify the Body Mass Index link : https://github.com/cdesterke/BMI_java
Experimental Hematology Cover #bioinformatics #CML #hematology #epigenetics
Bioinformatics tools used to obtained this cover in Experimental Hematology August 2018: deeptools for promoter heatmap and Omiccircos...
nine immune checkpoints in 2700 PBMCs by single cell sequencing #singlecell #immunotherapy #checkpoi
test of seurat R-package for the expression of nine immune checkpoints in 2700 PBMC by single cell sequencing
Mutation landscape plot on breast cancer subgroup #cancer #mutations #breastcancer #oncoprint
library(GenVisR) head(data) sample gene_name trv_type amino.acid.change 1 2 PTEN splice_region e7-3 2 ...
Estimate Multivariate Misclassification Error with Gaussian Finite Mixture Model #R #clustering #mul
estimate misclassification error of your multivariate model for machine learning validation #libraries library(FactoMineR) ...